
R version 3.2.2 (2015-08-14) -- "Fire Safety"
Copyright (C) 2015 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

  Natural language support but running in an English locale

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> # R file to be executed by run runEddyProc.sh or reddy_runLocal.sh
> 
> # stop("under construction, come back on 27th of June")
> # setwd("m:/services/REddyProcWeb/work/001")
> 
> dumpfileBasename <- "RBatch_dump"
> options(error=quote({dump.frames(dumpfileBasename,TRUE); stop(paste("dump in ",dumpfileBasename))}))
> options(warn=1)		# print all warnings (instead of a summary at the end)
> 
> .libPaths( c("../../Library", .libPaths()) )	# add REddyProc/Library as first library path, see readme in Library folder
> library(REddyProc)
Warning: replacing previous import by ‘tibble::as_tibble’ when loading ‘REddyProc’
Warning: replacing previous import by ‘tibble::tibble’ when loading ‘REddyProc’
> 
> cat('Using REddyProc version ', paste(unlist(packageVersion("REddyProc")),collapse="."),"\n")
Using REddyProc version  1.1 
> Sys.time()
[1] "2018-01-27 19:58:13 CET"
> 
> source("../../R/readConfig.R")
> configurationFileName="post.dcf"
> eddyProcConfiguration <- compileAndValidateEddyProcConfiguration(configurationFileName)
Entries supplied by the web form:
                 SiteID             ustarFilter       ustarFilterMethod 
              "Jackson"                    "NO"                   "RTw" 
   ustarFilterSeasoning  ustarFilterUncertainty            isGapfilling 
           "Continuous"                   "YES"                   "YES" 
     temperatureVarName                   email          fileIdentifier 
                 "Tair" "golub.gosia@gmail.com"             "836453466" 
   REddyProcWebRevision 
                   "71" 
> sourceFunctions(eddyProcConfiguration)
> 
> time <- system.time(
+ 		retval <- processEddyData(eddyProcConfiguration=eddyProcConfiguration) 	# call as function for easier debugging with dump
+ )		
Loaded file input.txt with the following variables (units):
 *** Year(-) DoY(-) Hour(-) NEE(-) CH4_MDS(-) H(-) LE(-) Tair(-) Ustar_MDS(-) Tau_MDS(-) ws_MDS(-) rH(-) Press_MDS(-) PAR_MDS(-) Rg(-) Rnet_MDS(-) Precip_MDS(-) TW_0_MDS(-) CO2c_MDS(-) TW1_MDS(-) CO20_MDS(-)
Number of '-9999' convertered to NA: 229116
'data.frame':	17520 obs. of  21 variables:
 $ Year      : atomic  2007 2007 2007 2007 2007 2007 2007 2007 2007 2007 ...
  ..- attr(*, "varnames")= chr "Year"
  ..- attr(*, "units")= chr "-"
 $ DoY       : atomic  1 1 1 1 1 1 1 1 1 1 ...
  ..- attr(*, "varnames")= chr "DoY"
  ..- attr(*, "units")= chr "-"
 $ Hour      : atomic  0.5 1 1.5 2 2.5 3 3.5 4 4.5 5 ...
  ..- attr(*, "varnames")= chr "Hour"
  ..- attr(*, "units")= chr "-"
 $ NEE       : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "NEE"
  ..- attr(*, "units")= chr "-"
 $ CH4_MDS   : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "CH4_MDS"
  ..- attr(*, "units")= chr "-"
 $ H         : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "H"
  ..- attr(*, "units")= chr "-"
 $ LE        : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "LE"
  ..- attr(*, "units")= chr "-"
 $ Tair      : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Tair"
  ..- attr(*, "units")= chr "-"
 $ Ustar_MDS : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Ustar_MDS"
  ..- attr(*, "units")= chr "-"
 $ Tau_MDS   : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Tau_MDS"
  ..- attr(*, "units")= chr "-"
 $ ws_MDS    : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "ws_MDS"
  ..- attr(*, "units")= chr "-"
 $ rH        : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "rH"
  ..- attr(*, "units")= chr "-"
 $ Press_MDS : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Press_MDS"
  ..- attr(*, "units")= chr "-"
 $ PAR_MDS   : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "PAR_MDS"
  ..- attr(*, "units")= chr "-"
 $ Rg        : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Rg"
  ..- attr(*, "units")= chr "-"
 $ Rnet_MDS  : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Rnet_MDS"
  ..- attr(*, "units")= chr "-"
 $ Precip_MDS: atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Precip_MDS"
  ..- attr(*, "units")= chr "-"
 $ TW_0_MDS  : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "TW_0_MDS"
  ..- attr(*, "units")= chr "-"
 $ CO2c_MDS  : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "CO2c_MDS"
  ..- attr(*, "units")= chr "-"
 $ TW1_MDS   : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "TW1_MDS"
  ..- attr(*, "units")= chr "-"
 $ CO20_MDS  : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "CO20_MDS"
  ..- attr(*, "units")= chr "-"
Warning in validateInputData(inputData) :
  Columns CH4_MDS,CO2c_MDS,CO20_MDS have no data. They are not included in processing.
[1] "Calculating VPD from rH and Tair."
Converted time format 'YDH' to POSIX with column name 'DateTime'.
Data variables picked for gap filling (dataVariablesToFill):  NEE,LE,H,Rg,VPD,rH,Tair,Ustar_MDS,Tau_MDS,ws_MDS,Press_MDS,PAR_MDS,Rnet_MDS,Precip_MDS,TW_0_MDS,TW1_MDS 
No additional columns picked to keep in processing
New sEddyProc class for site 'Jackson'
[1] "------------- Gapfilling ---------------"
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'NEE' with 12744 real gaps for gap filling of all 6205 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'NEE' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...4854
Look up table with window size of 14 days with Rg VPD Tair
.............268
Look up table with window size of 7 days with Rg
..........571
Mean diurnal course with window size of 0 days: .
.....175
Mean diurnal course with window size of 1 days: .
...8
Mean diurnal course with window size of 2 days: .
...0
Look up table with window size of 21 days with Rg VPD Tair
...176
Look up table with window size of 28 days with Rg VPD Tair
.53
Look up table with window size of 35 days with Rg VPD Tair
.12
Look up table with window size of 42 days with Rg VPD Tair
2
Look up table with window size of 49 days with Rg VPD Tair
0
Look up table with window size of 56 days with Rg VPD Tair
0
Look up table with window size of 63 days with Rg VPD Tair
0
Look up table with window size of 70 days with Rg VPD Tair
0
Look up table with window size of 14 days with Rg
59
Look up table with window size of 21 days with Rg
10
Look up table with window size of 28 days with Rg
0
Look up table with window size of 35 days with Rg
0
Look up table with window size of 42 days with Rg
0
Look up table with window size of 49 days with Rg
0
Look up table with window size of 56 days with Rg
0
Look up table with window size of 63 days with Rg
0
Look up table with window size of 70 days with Rg
0
Mean diurnal course with window size of 7 days: .
4
Mean diurnal course with window size of 14 days: .
9
Mean diurnal course with window size of 21 days: .
4
Finished gap filling of 'NEE' in 4 seconds. Artificial gaps filled: 6205, real gaps filled: 12744, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'LE' with 11749 real gaps for gap filling of all 6205 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'LE' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5349
Look up table with window size of 14 days with Rg VPD Tair
........22
Look up table with window size of 7 days with Rg
........634
Mean diurnal course with window size of 0 days: .
..194
Mean diurnal course with window size of 1 days: .
6
Finished gap filling of 'LE' in 3 seconds. Artificial gaps filled: 6205, real gaps filled: 11749, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'H' with 11798 real gaps for gap filling of all 6205 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'H' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5346
Look up table with window size of 14 days with Rg VPD Tair
........27
Look up table with window size of 7 days with Rg
........632
Mean diurnal course with window size of 0 days: .
..195
Mean diurnal course with window size of 1 days: .
5
Finished gap filling of 'H' in 3 seconds. Artificial gaps filled: 6205, real gaps filled: 11798, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'Rg' with 11515 real gaps for gap filling.
Restriced MDS algorithm for gap filling of 'Rg' with no meteo conditions and hence only MDC.
Mean diurnal course with window size of 0 days: .
..158
Mean diurnal course with window size of 1 days: .
42
Finished gap filling of 'Rg' in 0 seconds. Artificial gaps filled: 6205, real gaps filled: 11515, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11316 will not be filled!
Initialized variable 'VPD' with 11979 real gaps for gap filling.
Limited MDS algorithm for gap filling of 'VPD' with LUT(Rg only) and MDC.
Look up table with window size of 7 days with Rg
......626
Mean diurnal course with window size of 0 days: .
13
Mean diurnal course with window size of 1 days: .
24
Finished gap filling of 'VPD' in 0 seconds. Artificial gaps filled: 6204, real gaps filled: 11979, unfilled (long) gaps: 11316.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'rH' with 11658 real gaps for gap filling.
Full MDS algorithm for gap filling of 'rH' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
...0
Look up table with window size of 14 days with Rg VPD Tair
...0
Look up table with window size of 7 days with Rg
...317
Mean diurnal course with window size of 0 days: .
11
Mean diurnal course with window size of 1 days: .
15
Finished gap filling of 'rH' in 0 seconds. Artificial gaps filled: 6205, real gaps filled: 11658, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11316 will not be filled!
Initialized variable 'Tair' with 11665 real gaps for gap filling.
Limited MDS algorithm for gap filling of 'Tair' with LUT(Rg only) and MDC.
Look up table with window size of 7 days with Rg
...326
Mean diurnal course with window size of 0 days: .
6
Mean diurnal course with window size of 1 days: .
17
Finished gap filling of 'Tair' in 0 seconds. Artificial gaps filled: 6204, real gaps filled: 11665, unfilled (long) gaps: 11316.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'Ustar_MDS' with 11945 real gaps for gap filling of all 6205 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'Ustar_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5351
Look up table with window size of 14 days with Rg VPD Tair
........23
Look up table with window size of 7 days with Rg
........631
Mean diurnal course with window size of 0 days: .
..195
Mean diurnal course with window size of 1 days: .
5
Finished gap filling of 'Ustar_MDS' in 3 seconds. Artificial gaps filled: 6205, real gaps filled: 11945, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'Tau_MDS' with 11943 real gaps for gap filling of all 6205 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'Tau_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5351
Look up table with window size of 14 days with Rg VPD Tair
........23
Look up table with window size of 7 days with Rg
........631
Mean diurnal course with window size of 0 days: .
..195
Mean diurnal course with window size of 1 days: .
5
Finished gap filling of 'Tau_MDS' in 3 seconds. Artificial gaps filled: 6205, real gaps filled: 11943, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'ws_MDS' with 11636 real gaps for gap filling of all 6205 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'ws_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5354
Look up table with window size of 14 days with Rg VPD Tair
........20
Look up table with window size of 7 days with Rg
........631
Mean diurnal course with window size of 0 days: .
..197
Mean diurnal course with window size of 1 days: .
3
Finished gap filling of 'ws_MDS' in 3 seconds. Artificial gaps filled: 6205, real gaps filled: 11636, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'Press_MDS' with 12002 real gaps for gap filling of all 6205 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'Press_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5291
Look up table with window size of 14 days with Rg VPD Tair
.........74
Look up table with window size of 7 days with Rg
........640
Mean diurnal course with window size of 0 days: .
..187
Mean diurnal course with window size of 1 days: .
12
Mean diurnal course with window size of 2 days: .
1
Finished gap filling of 'Press_MDS' in 3 seconds. Artificial gaps filled: 6205, real gaps filled: 12002, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'PAR_MDS' with 11515 real gaps for gap filling of all 6205 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'PAR_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5357
Look up table with window size of 14 days with Rg VPD Tair
........18
Look up table with window size of 7 days with Rg
........630
Mean diurnal course with window size of 0 days: .
..158
Mean diurnal course with window size of 1 days: .
42
Finished gap filling of 'PAR_MDS' in 3 seconds. Artificial gaps filled: 6205, real gaps filled: 11515, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'Rnet_MDS' with 11653 real gaps for gap filling of all 6205 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'Rnet_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5355
Look up table with window size of 14 days with Rg VPD Tair
........19
Look up table with window size of 7 days with Rg
........631
Mean diurnal course with window size of 0 days: .
..170
Mean diurnal course with window size of 1 days: .
30
Finished gap filling of 'Rnet_MDS' in 3 seconds. Artificial gaps filled: 6205, real gaps filled: 11653, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11315 will not be filled!
Initialized variable 'Precip_MDS' with 11429 real gaps for gap filling of all 6205 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'Precip_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5357
Look up table with window size of 14 days with Rg VPD Tair
........18
Look up table with window size of 7 days with Rg
........630
Mean diurnal course with window size of 0 days: .
..200
Finished gap filling of 'Precip_MDS' in 3 seconds. Artificial gaps filled: 6205, real gaps filled: 11429, unfilled (long) gaps: 11315.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11316 will not be filled!
Initialized variable 'TW_0_MDS' with 11627 real gaps for gap filling of all 6204 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'TW_0_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5354
Look up table with window size of 14 days with Rg VPD Tair
........21
Look up table with window size of 7 days with Rg
........629
Mean diurnal course with window size of 0 days: .
..178
Mean diurnal course with window size of 1 days: .
22
Finished gap filling of 'TW_0_MDS' in 3 seconds. Artificial gaps filled: 6204, real gaps filled: 11627, unfilled (long) gaps: 11316.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 11317 will not be filled!
Initialized variable 'TW1_MDS' with 11677 real gaps for gap filling of all 6203 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'TW1_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
...5353
Look up table with window size of 14 days with Rg VPD Tair
........20
Look up table with window size of 7 days with Rg
........630
Mean diurnal course with window size of 0 days: .
..182
Mean diurnal course with window size of 1 days: .
18
Finished gap filling of 'TW1_MDS' in 3 seconds. Artificial gaps filled: 6203, real gaps filled: 11677, unfilled (long) gaps: 11317.
Saved plot to: ./Jackson_2007_FP_NEE.pdf
Saved plot to: ./Jackson_2007_Flux_NEE.pdf
Saved plot to: ./Jackson_2007_FP_LE.pdf
Saved plot to: ./Jackson_2007_Flux_LE.pdf
Saved plot to: ./Jackson_2007_FP_H.pdf
Saved plot to: ./Jackson_2007_Flux_H.pdf
Saved plot to: ./Jackson_2007_FP_Rg.pdf
Saved plot to: ./Jackson_2007_Flux_Rg.pdf
Saved plot to: ./Jackson_2007_FP_VPD.pdf
Saved plot to: ./Jackson_2007_Flux_VPD.pdf
Saved plot to: ./Jackson_2007_FP_rH.pdf
Saved plot to: ./Jackson_2007_Flux_rH.pdf
Saved plot to: ./Jackson_2007_FP_Tair.pdf
Saved plot to: ./Jackson_2007_Flux_Tair.pdf
Saved plot to: ./Jackson_2007_FP_Ustar_MDS.pdf
Saved plot to: ./Jackson_2007_Flux_Ustar_MDS.pdf
Saved plot to: ./Jackson_2007_FP_Tau_MDS.pdf
Saved plot to: ./Jackson_2007_Flux_Tau_MDS.pdf
Saved plot to: ./Jackson_2007_FP_ws_MDS.pdf
Saved plot to: ./Jackson_2007_Flux_ws_MDS.pdf
Saved plot to: ./Jackson_2007_FP_Press_MDS.pdf
Saved plot to: ./Jackson_2007_Flux_Press_MDS.pdf
Saved plot to: ./Jackson_2007_FP_PAR_MDS.pdf
Saved plot to: ./Jackson_2007_Flux_PAR_MDS.pdf
Saved plot to: ./Jackson_2007_FP_Rnet_MDS.pdf
Saved plot to: ./Jackson_2007_Flux_Rnet_MDS.pdf
Saved plot to: ./Jackson_2007_FP_Precip_MDS.pdf
Saved plot to: ./Jackson_2007_Flux_Precip_MDS.pdf
Saved plot to: ./Jackson_2007_FP_TW_0_MDS.pdf
Saved plot to: ./Jackson_2007_Flux_TW_0_MDS.pdf
Saved plot to: ./Jackson_2007_FP_TW1_MDS.pdf
Saved plot to: ./Jackson_2007_Flux_TW1_MDS.pdf
Saved plot to: ./Jackson_2007_FP_NEE_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_NEE_f.pdf
Saved plot to: ./Jackson_2007_DSumU_NEE_f.pdf
Saved plot to: ./Jackson_2007_Flux_NEE_f.pdf
Saved plot to: ./Jackson_2007_FP_LE_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_LE_f.pdf
Saved plot to: ./Jackson_2007_DSumU_LE_f.pdf
Saved plot to: ./Jackson_2007_Flux_LE_f.pdf
Saved plot to: ./Jackson_2007_FP_H_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_H_f.pdf
Saved plot to: ./Jackson_2007_DSumU_H_f.pdf
Saved plot to: ./Jackson_2007_Flux_H_f.pdf
Saved plot to: ./Jackson_2007_FP_Rg_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_Rg_f.pdf
Saved plot to: ./Jackson_2007_DSum_Rg_f.pdf
Saved plot to: ./Jackson_2007_Flux_Rg_f.pdf
Saved plot to: ./Jackson_2007_FP_VPD_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_VPD_f.pdf
Saved plot to: ./Jackson_2007_DSum_VPD_f.pdf
Saved plot to: ./Jackson_2007_Flux_VPD_f.pdf
Saved plot to: ./Jackson_2007_FP_rH_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_rH_f.pdf
Saved plot to: ./Jackson_2007_DSum_rH_f.pdf
Saved plot to: ./Jackson_2007_Flux_rH_f.pdf
Saved plot to: ./Jackson_2007_FP_Tair_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_Tair_f.pdf
Saved plot to: ./Jackson_2007_DSum_Tair_f.pdf
Saved plot to: ./Jackson_2007_Flux_Tair_f.pdf
Saved plot to: ./Jackson_2007_FP_Ustar_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_Ustar_MDS_f.pdf
Saved plot to: ./Jackson_2007_DSumU_Ustar_MDS_f.pdf
Saved plot to: ./Jackson_2007_Flux_Ustar_MDS_f.pdf
Saved plot to: ./Jackson_2007_FP_Tau_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_Tau_MDS_f.pdf
Saved plot to: ./Jackson_2007_DSumU_Tau_MDS_f.pdf
Saved plot to: ./Jackson_2007_Flux_Tau_MDS_f.pdf
Saved plot to: ./Jackson_2007_FP_ws_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_ws_MDS_f.pdf
Saved plot to: ./Jackson_2007_DSumU_ws_MDS_f.pdf
Saved plot to: ./Jackson_2007_Flux_ws_MDS_f.pdf
Saved plot to: ./Jackson_2007_FP_Press_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_Press_MDS_f.pdf
Saved plot to: ./Jackson_2007_DSumU_Press_MDS_f.pdf
Saved plot to: ./Jackson_2007_Flux_Press_MDS_f.pdf
Saved plot to: ./Jackson_2007_FP_PAR_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_PAR_MDS_f.pdf
Saved plot to: ./Jackson_2007_DSumU_PAR_MDS_f.pdf
Saved plot to: ./Jackson_2007_Flux_PAR_MDS_f.pdf
Saved plot to: ./Jackson_2007_FP_Rnet_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_Rnet_MDS_f.pdf
Saved plot to: ./Jackson_2007_DSumU_Rnet_MDS_f.pdf
Saved plot to: ./Jackson_2007_Flux_Rnet_MDS_f.pdf
Saved plot to: ./Jackson_2007_FP_Precip_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_Precip_MDS_f.pdf
Saved plot to: ./Jackson_2007_DSumU_Precip_MDS_f.pdf
Saved plot to: ./Jackson_2007_Flux_Precip_MDS_f.pdf
Saved plot to: ./Jackson_2007_FP_TW_0_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_TW_0_MDS_f.pdf
Saved plot to: ./Jackson_2007_DSumU_TW_0_MDS_f.pdf
Saved plot to: ./Jackson_2007_Flux_TW_0_MDS_f.pdf
Saved plot to: ./Jackson_2007_FP_TW1_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: May!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: June!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: July!
Saved plot to: ./Jackson_2007_DC_TW1_MDS_f.pdf
Saved plot to: ./Jackson_2007_DSumU_TW1_MDS_f.pdf
Saved plot to: ./Jackson_2007_Flux_TW1_MDS_f.pdf
Number of NA convertered to '-9999': 1982326
Wrote tab separated textfile: output.txt
> 
> print("converting generated output pdf files to png format for display on results page.") # done in shell script 
[1] "converting generated output pdf files to png format for display on results page."
> 
> # write logEntry that will be appended by to reddy_jobs_out.txt by reddy_bjobs.sh
> logEntry <- paste( time["user.self"], retval$mode, retval$inputSize, sep="," )
> cat( logEntry, file="logEntry.txt")
> 
> 
> 
> proc.time()
   user  system elapsed 
 66.524   0.204  67.068 
