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> # R file to be executed by run runEddyProc.sh or reddy_runLocal.sh
> 
> # stop("under construction, come back on 27th of June")
> # setwd("m:/services/REddyProcWeb/work/001")
> 
> dumpfileBasename <- "RBatch_dump"
> options(error=quote({dump.frames(dumpfileBasename,TRUE); stop(paste("dump in ",dumpfileBasename))}))
> options(warn=1)		# print all warnings (instead of a summary at the end)
> 
> .libPaths( c("../../Library", .libPaths()) )	# add REddyProc/Library as first library path, see readme in Library folder
> library(REddyProc)
Warning: replacing previous import by ‘tibble::as_tibble’ when loading ‘REddyProc’
Warning: replacing previous import by ‘tibble::tibble’ when loading ‘REddyProc’
> 
> cat('Using REddyProc version ', paste(unlist(packageVersion("REddyProc")),collapse="."),"\n")
Using REddyProc version  1.1 
> Sys.time()
[1] "2018-01-27 19:56:10 CET"
> 
> source("../../R/readConfig.R")
> configurationFileName="post.dcf"
> eddyProcConfiguration <- compileAndValidateEddyProcConfiguration(configurationFileName)
Entries supplied by the web form:
                 SiteID             ustarFilter       ustarFilterMethod 
              "Douglas"                    "NO"                   "RTw" 
   ustarFilterSeasoning  ustarFilterUncertainty            isGapfilling 
           "Continuous"                   "YES"                   "YES" 
     temperatureVarName                   email          fileIdentifier 
                 "Tair" "golub.gosia@gmail.com"             "679066526" 
   REddyProcWebRevision 
                   "71" 
> sourceFunctions(eddyProcConfiguration)
> 
> time <- system.time(
+ 		retval <- processEddyData(eddyProcConfiguration=eddyProcConfiguration) 	# call as function for easier debugging with dump
+ )		
Loaded file input.txt with the following variables (units):
 *** Year(-) DoY(-) Hour(-) NEE(-) CH4_MDS(-) H(-) LE(-) Tair(-) Ustar_MDS(-) Tau_MDS(-) ws_MDS(-) rH(-) Press_MDS(-) PAR_MDS(-) Rg(-) Rnet_MDS(-) Precip_MDS(-) TW_0_MDS(-) CO2c_MDS(-) TW1_MDS(-) CO20_MDS(-)
Number of '-9999' convertered to NA: 260313
'data.frame':	17520 obs. of  21 variables:
 $ Year      : atomic  2014 2014 2014 2014 2014 2014 2014 2014 2014 2014 ...
  ..- attr(*, "varnames")= chr "Year"
  ..- attr(*, "units")= chr "-"
 $ DoY       : atomic  1 1 1 1 1 1 1 1 1 1 ...
  ..- attr(*, "varnames")= chr "DoY"
  ..- attr(*, "units")= chr "-"
 $ Hour      : atomic  0.5 1 1.5 2 2.5 3 3.5 4 4.5 5 ...
  ..- attr(*, "varnames")= chr "Hour"
  ..- attr(*, "units")= chr "-"
 $ NEE       : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "NEE"
  ..- attr(*, "units")= chr "-"
 $ CH4_MDS   : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "CH4_MDS"
  ..- attr(*, "units")= chr "-"
 $ H         : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "H"
  ..- attr(*, "units")= chr "-"
 $ LE        : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "LE"
  ..- attr(*, "units")= chr "-"
 $ Tair      : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Tair"
  ..- attr(*, "units")= chr "-"
 $ Ustar_MDS : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Ustar_MDS"
  ..- attr(*, "units")= chr "-"
 $ Tau_MDS   : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Tau_MDS"
  ..- attr(*, "units")= chr "-"
 $ ws_MDS    : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "ws_MDS"
  ..- attr(*, "units")= chr "-"
 $ rH        : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "rH"
  ..- attr(*, "units")= chr "-"
 $ Press_MDS : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Press_MDS"
  ..- attr(*, "units")= chr "-"
 $ PAR_MDS   : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "PAR_MDS"
  ..- attr(*, "units")= chr "-"
 $ Rg        : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Rg"
  ..- attr(*, "units")= chr "-"
 $ Rnet_MDS  : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Rnet_MDS"
  ..- attr(*, "units")= chr "-"
 $ Precip_MDS: atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "Precip_MDS"
  ..- attr(*, "units")= chr "-"
 $ TW_0_MDS  : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "TW_0_MDS"
  ..- attr(*, "units")= chr "-"
 $ CO2c_MDS  : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "CO2c_MDS"
  ..- attr(*, "units")= chr "-"
 $ TW1_MDS   : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "TW1_MDS"
  ..- attr(*, "units")= chr "-"
 $ CO20_MDS  : atomic  NA NA NA NA NA NA NA NA NA NA ...
  ..- attr(*, "varnames")= chr "CO20_MDS"
  ..- attr(*, "units")= chr "-"
Warning in validateInputData(inputData) :
  Columns CH4_MDS,Precip_MDS,CO20_MDS have no data. They are not included in processing.
[1] "Calculating VPD from rH and Tair."
Converted time format 'YDH' to POSIX with column name 'DateTime'.
Data variables picked for gap filling (dataVariablesToFill):  NEE,LE,H,Rg,VPD,rH,Tair,Ustar_MDS,Tau_MDS,ws_MDS,Press_MDS,PAR_MDS,Rnet_MDS,TW_0_MDS,CO2c_MDS,TW1_MDS 
No additional columns picked to keep in processing
New sEddyProc class for site 'Douglas'
[1] "------------- Gapfilling ---------------"
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6866 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13696 and 17520 will not be filled!
Initialized variable 'NEE' with 14655 real gaps for gap filling of all 6829 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'NEE' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.........2684
Look up table with window size of 14 days with Rg VPD Tair
.........................................37
Look up table with window size of 7 days with Rg
.........................................1598
Mean diurnal course with window size of 0 days: .
.........................138
Mean diurnal course with window size of 1 days: .
.......................1061
Mean diurnal course with window size of 2 days: .
.............554
Look up table with window size of 21 days with Rg VPD Tair
.......0
Look up table with window size of 28 days with Rg VPD Tair
.......0
Look up table with window size of 35 days with Rg VPD Tair
.......0
Look up table with window size of 42 days with Rg VPD Tair
.......0
Look up table with window size of 49 days with Rg VPD Tair
.......0
Look up table with window size of 56 days with Rg VPD Tair
.......0
Look up table with window size of 63 days with Rg VPD Tair
.......0
Look up table with window size of 70 days with Rg VPD Tair
.......0
Look up table with window size of 14 days with Rg
.......1
Look up table with window size of 21 days with Rg
.......0
Look up table with window size of 28 days with Rg
.......0
Look up table with window size of 35 days with Rg
.......0
Look up table with window size of 42 days with Rg
.......0
Look up table with window size of 49 days with Rg
.......0
Look up table with window size of 56 days with Rg
.......0
Look up table with window size of 63 days with Rg
.......0
Look up table with window size of 70 days with Rg
.......0
Mean diurnal course with window size of 7 days: .
.......744
Mean diurnal course with window size of 14 days: .
12
Finished gap filling of 'NEE' in 14 seconds. Artificial gaps filled: 6829, real gaps filled: 14655, unfilled (long) gaps: 10691.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6866 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13696 and 17520 will not be filled!
Initialized variable 'LE' with 14655 real gaps for gap filling of all 6829 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'LE' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.........2673
Look up table with window size of 14 days with Rg VPD Tair
.........................................42
Look up table with window size of 7 days with Rg
.........................................1604
Mean diurnal course with window size of 0 days: .
.........................136
Mean diurnal course with window size of 1 days: .
.......................1041
Mean diurnal course with window size of 2 days: .
.............568
Look up table with window size of 21 days with Rg VPD Tair
.......0
Look up table with window size of 28 days with Rg VPD Tair
.......0
Look up table with window size of 35 days with Rg VPD Tair
.......0
Look up table with window size of 42 days with Rg VPD Tair
.......0
Look up table with window size of 49 days with Rg VPD Tair
.......0
Look up table with window size of 56 days with Rg VPD Tair
.......0
Look up table with window size of 63 days with Rg VPD Tair
.......0
Look up table with window size of 70 days with Rg VPD Tair
.......0
Look up table with window size of 14 days with Rg
.......1
Look up table with window size of 21 days with Rg
.......0
Look up table with window size of 28 days with Rg
.......0
Look up table with window size of 35 days with Rg
.......0
Look up table with window size of 42 days with Rg
.......0
Look up table with window size of 49 days with Rg
.......0
Look up table with window size of 56 days with Rg
.......0
Look up table with window size of 63 days with Rg
.......0
Look up table with window size of 70 days with Rg
.......0
Mean diurnal course with window size of 7 days: .
.......752
Mean diurnal course with window size of 14 days: .
12
Finished gap filling of 'LE' in 13 seconds. Artificial gaps filled: 6829, real gaps filled: 14655, unfilled (long) gaps: 10691.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6848 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13696 and 17520 will not be filled!
Initialized variable 'H' with 14576 real gaps for gap filling of all 6847 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'H' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.........2679
Look up table with window size of 14 days with Rg VPD Tair
.........................................29
Look up table with window size of 7 days with Rg
.........................................1613
Mean diurnal course with window size of 0 days: .
.........................152
Mean diurnal course with window size of 1 days: .
.......................1083
Mean diurnal course with window size of 2 days: .
............566
Look up table with window size of 21 days with Rg VPD Tair
.......0
Look up table with window size of 28 days with Rg VPD Tair
.......0
Look up table with window size of 35 days with Rg VPD Tair
.......0
Look up table with window size of 42 days with Rg VPD Tair
.......0
Look up table with window size of 49 days with Rg VPD Tair
.......0
Look up table with window size of 56 days with Rg VPD Tair
.......0
Look up table with window size of 63 days with Rg VPD Tair
.......0
Look up table with window size of 70 days with Rg VPD Tair
.......0
Look up table with window size of 14 days with Rg
.......1
Look up table with window size of 21 days with Rg
.......0
Look up table with window size of 28 days with Rg
.......0
Look up table with window size of 35 days with Rg
.......0
Look up table with window size of 42 days with Rg
.......0
Look up table with window size of 49 days with Rg
.......0
Look up table with window size of 56 days with Rg
.......0
Look up table with window size of 63 days with Rg
.......0
Look up table with window size of 70 days with Rg
.......0
Mean diurnal course with window size of 7 days: .
.......713
Mean diurnal course with window size of 14 days: .
11
Finished gap filling of 'H' in 13 seconds. Artificial gaps filled: 6847, real gaps filled: 14576, unfilled (long) gaps: 10673.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6846 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13700 and 17520 will not be filled!
Initialized variable 'Rg' with 13191 real gaps for gap filling.
Restriced MDS algorithm for gap filling of 'Rg' with no meteo conditions and hence only MDC.
Mean diurnal course with window size of 0 days: .
.........................140
Mean diurnal course with window size of 1 days: .
.......................1373
Mean diurnal course with window size of 2 days: .
..........550
Mean diurnal course with window size of 7 days: .
....461
Finished gap filling of 'Rg' in 0 seconds. Artificial gaps filled: 6853, real gaps filled: 13191, unfilled (long) gaps: 10667.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6846 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13700 and 17520 will not be filled!
Initialized variable 'VPD' with 14685 real gaps for gap filling.
Limited MDS algorithm for gap filling of 'VPD' with LUT(Rg only) and MDC.
Look up table with window size of 7 days with Rg
........................................1538
Mean diurnal course with window size of 0 days: .
........................57
Mean diurnal course with window size of 1 days: .
........................1082
Mean diurnal course with window size of 2 days: .
.............584
Look up table with window size of 14 days with Rg
.......53
Look up table with window size of 21 days with Rg
.......1
Look up table with window size of 28 days with Rg
.......0
Look up table with window size of 35 days with Rg
.......0
Look up table with window size of 42 days with Rg
.......0
Look up table with window size of 49 days with Rg
.......0
Look up table with window size of 56 days with Rg
.......0
Look up table with window size of 63 days with Rg
.......0
Look up table with window size of 70 days with Rg
.......0
Mean diurnal course with window size of 7 days: .
.......703
Finished gap filling of 'VPD' in 4 seconds. Artificial gaps filled: 6853, real gaps filled: 14685, unfilled (long) gaps: 10667.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6846 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13700 and 17520 will not be filled!
Initialized variable 'rH' with 14552 real gaps for gap filling.
Full MDS algorithm for gap filling of 'rH' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
......................................0
Look up table with window size of 14 days with Rg VPD Tair
......................................0
Look up table with window size of 7 days with Rg
......................................1413
Mean diurnal course with window size of 0 days: .
........................62
Mean diurnal course with window size of 1 days: .
........................1142
Mean diurnal course with window size of 2 days: .
............583
Look up table with window size of 21 days with Rg VPD Tair
......0
Look up table with window size of 28 days with Rg VPD Tair
......0
Look up table with window size of 35 days with Rg VPD Tair
......0
Look up table with window size of 42 days with Rg VPD Tair
......0
Look up table with window size of 49 days with Rg VPD Tair
......0
Look up table with window size of 56 days with Rg VPD Tair
......0
Look up table with window size of 63 days with Rg VPD Tair
......0
Look up table with window size of 70 days with Rg VPD Tair
......0
Look up table with window size of 14 days with Rg
......48
Look up table with window size of 21 days with Rg
......1
Look up table with window size of 28 days with Rg
......0
Look up table with window size of 35 days with Rg
......0
Look up table with window size of 42 days with Rg
......0
Look up table with window size of 49 days with Rg
......0
Look up table with window size of 56 days with Rg
......0
Look up table with window size of 63 days with Rg
......0
Look up table with window size of 70 days with Rg
......0
Mean diurnal course with window size of 7 days: .
......636
Finished gap filling of 'rH' in 11 seconds. Artificial gaps filled: 6853, real gaps filled: 14552, unfilled (long) gaps: 10667.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6846 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13729 and 17520 will not be filled!
Initialized variable 'Tair' with 12598 real gaps for gap filling.
Limited MDS algorithm for gap filling of 'Tair' with LUT(Rg only) and MDC.
Look up table with window size of 7 days with Rg
...................195
Mean diurnal course with window size of 0 days: .
.................48
Mean diurnal course with window size of 1 days: .
.................1076
Mean diurnal course with window size of 2 days: .
......442
Look up table with window size of 14 days with Rg
.0
Look up table with window size of 21 days with Rg
.0
Look up table with window size of 28 days with Rg
.0
Look up table with window size of 35 days with Rg
.0
Look up table with window size of 42 days with Rg
.0
Look up table with window size of 49 days with Rg
.0
Look up table with window size of 56 days with Rg
.0
Look up table with window size of 63 days with Rg
.0
Look up table with window size of 70 days with Rg
.0
Mean diurnal course with window size of 7 days: .
.199
Finished gap filling of 'Tair' in 2 seconds. Artificial gaps filled: 6882, real gaps filled: 12598, unfilled (long) gaps: 10638.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6846 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13699 and 17520 will not be filled!
Initialized variable 'Ustar_MDS' with 14437 real gaps for gap filling of all 6852 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'Ustar_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.........2694
Look up table with window size of 14 days with Rg VPD Tair
.........................................29
Look up table with window size of 7 days with Rg
.........................................1604
Mean diurnal course with window size of 0 days: .
.........................159
Mean diurnal course with window size of 1 days: .
.......................1154
Mean diurnal course with window size of 2 days: .
............579
Look up table with window size of 21 days with Rg VPD Tair
......0
Look up table with window size of 28 days with Rg VPD Tair
......0
Look up table with window size of 35 days with Rg VPD Tair
......0
Look up table with window size of 42 days with Rg VPD Tair
......0
Look up table with window size of 49 days with Rg VPD Tair
......0
Look up table with window size of 56 days with Rg VPD Tair
......0
Look up table with window size of 63 days with Rg VPD Tair
......0
Look up table with window size of 70 days with Rg VPD Tair
......0
Look up table with window size of 14 days with Rg
......1
Look up table with window size of 21 days with Rg
......0
Look up table with window size of 28 days with Rg
......0
Look up table with window size of 35 days with Rg
......0
Look up table with window size of 42 days with Rg
......0
Look up table with window size of 49 days with Rg
......0
Look up table with window size of 56 days with Rg
......0
Look up table with window size of 63 days with Rg
......0
Look up table with window size of 70 days with Rg
......0
Mean diurnal course with window size of 7 days: .
......632
Finished gap filling of 'Ustar_MDS' in 18 seconds. Artificial gaps filled: 6852, real gaps filled: 14437, unfilled (long) gaps: 10668.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6846 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13699 and 17520 will not be filled!
Initialized variable 'Tau_MDS' with 14434 real gaps for gap filling of all 6852 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'Tau_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.........2694
Look up table with window size of 14 days with Rg VPD Tair
.........................................31
Look up table with window size of 7 days with Rg
.........................................1601
Mean diurnal course with window size of 0 days: .
.........................160
Mean diurnal course with window size of 1 days: .
.......................1155
Mean diurnal course with window size of 2 days: .
............586
Look up table with window size of 21 days with Rg VPD Tair
......0
Look up table with window size of 28 days with Rg VPD Tair
......0
Look up table with window size of 35 days with Rg VPD Tair
......0
Look up table with window size of 42 days with Rg VPD Tair
......0
Look up table with window size of 49 days with Rg VPD Tair
......0
Look up table with window size of 56 days with Rg VPD Tair
......0
Look up table with window size of 63 days with Rg VPD Tair
......0
Look up table with window size of 70 days with Rg VPD Tair
......0
Look up table with window size of 14 days with Rg
......1
Look up table with window size of 21 days with Rg
......0
Look up table with window size of 28 days with Rg
......0
Look up table with window size of 35 days with Rg
......0
Look up table with window size of 42 days with Rg
......0
Look up table with window size of 49 days with Rg
......0
Look up table with window size of 56 days with Rg
......0
Look up table with window size of 63 days with Rg
......0
Look up table with window size of 70 days with Rg
......0
Mean diurnal course with window size of 7 days: .
......624
Finished gap filling of 'Tau_MDS' in 13 seconds. Artificial gaps filled: 6852, real gaps filled: 14434, unfilled (long) gaps: 10668.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6846 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13699 and 17520 will not be filled!
Initialized variable 'ws_MDS' with 14419 real gaps for gap filling of all 6852 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'ws_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.........2695
Look up table with window size of 14 days with Rg VPD Tair
.........................................28
Look up table with window size of 7 days with Rg
.........................................1604
Mean diurnal course with window size of 0 days: .
.........................159
Mean diurnal course with window size of 1 days: .
.......................1157
Mean diurnal course with window size of 2 days: .
............585
Look up table with window size of 21 days with Rg VPD Tair
......0
Look up table with window size of 28 days with Rg VPD Tair
......0
Look up table with window size of 35 days with Rg VPD Tair
......0
Look up table with window size of 42 days with Rg VPD Tair
......0
Look up table with window size of 49 days with Rg VPD Tair
......0
Look up table with window size of 56 days with Rg VPD Tair
......0
Look up table with window size of 63 days with Rg VPD Tair
......0
Look up table with window size of 70 days with Rg VPD Tair
......0
Look up table with window size of 14 days with Rg
......1
Look up table with window size of 21 days with Rg
......0
Look up table with window size of 28 days with Rg
......0
Look up table with window size of 35 days with Rg
......0
Look up table with window size of 42 days with Rg
......0
Look up table with window size of 49 days with Rg
......0
Look up table with window size of 56 days with Rg
......0
Look up table with window size of 63 days with Rg
......0
Look up table with window size of 70 days with Rg
......0
Mean diurnal course with window size of 7 days: .
......623
Finished gap filling of 'ws_MDS' in 11 seconds. Artificial gaps filled: 6852, real gaps filled: 14419, unfilled (long) gaps: 10668.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6846 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13696 and 17520 will not be filled!
Initialized variable 'Press_MDS' with 13345 real gaps for gap filling of all 6849 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'Press_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.........2690
Look up table with window size of 14 days with Rg VPD Tair
.........................................29
Look up table with window size of 7 days with Rg
.........................................1606
Mean diurnal course with window size of 0 days: .
.........................208
Mean diurnal course with window size of 1 days: .
.......................1232
Mean diurnal course with window size of 2 days: .
..........515
Look up table with window size of 21 days with Rg VPD Tair
.....0
Look up table with window size of 28 days with Rg VPD Tair
.....0
Look up table with window size of 35 days with Rg VPD Tair
.....0
Look up table with window size of 42 days with Rg VPD Tair
.....0
Look up table with window size of 49 days with Rg VPD Tair
.....0
Look up table with window size of 56 days with Rg VPD Tair
.....0
Look up table with window size of 63 days with Rg VPD Tair
.....0
Look up table with window size of 70 days with Rg VPD Tair
.....0
Look up table with window size of 14 days with Rg
.....0
Look up table with window size of 21 days with Rg
.....0
Look up table with window size of 28 days with Rg
.....0
Look up table with window size of 35 days with Rg
.....0
Look up table with window size of 42 days with Rg
.....0
Look up table with window size of 49 days with Rg
.....0
Look up table with window size of 56 days with Rg
.....0
Look up table with window size of 63 days with Rg
.....0
Look up table with window size of 70 days with Rg
.....0
Mean diurnal course with window size of 7 days: .
.....563
Mean diurnal course with window size of 14 days: .
6
Finished gap filling of 'Press_MDS' in 11 seconds. Artificial gaps filled: 6849, real gaps filled: 13345, unfilled (long) gaps: 10671.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6846 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13700 and 17520 will not be filled!
Initialized variable 'PAR_MDS' with 13191 real gaps for gap filling of all 6853 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'PAR_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.........2709
Look up table with window size of 14 days with Rg VPD Tair
.........................................20
Look up table with window size of 7 days with Rg
.........................................1600
Mean diurnal course with window size of 0 days: .
.........................140
Mean diurnal course with window size of 1 days: .
.......................1373
Mean diurnal course with window size of 2 days: .
..........550
Look up table with window size of 21 days with Rg VPD Tair
....0
Look up table with window size of 28 days with Rg VPD Tair
....0
Look up table with window size of 35 days with Rg VPD Tair
....0
Look up table with window size of 42 days with Rg VPD Tair
....0
Look up table with window size of 49 days with Rg VPD Tair
....0
Look up table with window size of 56 days with Rg VPD Tair
....0
Look up table with window size of 63 days with Rg VPD Tair
....0
Look up table with window size of 70 days with Rg VPD Tair
....0
Look up table with window size of 14 days with Rg
....0
Look up table with window size of 21 days with Rg
....0
Look up table with window size of 28 days with Rg
....0
Look up table with window size of 35 days with Rg
....0
Look up table with window size of 42 days with Rg
....0
Look up table with window size of 49 days with Rg
....0
Look up table with window size of 56 days with Rg
....0
Look up table with window size of 63 days with Rg
....0
Look up table with window size of 70 days with Rg
....0
Mean diurnal course with window size of 7 days: .
....461
Finished gap filling of 'PAR_MDS' in 9 seconds. Artificial gaps filled: 6853, real gaps filled: 13191, unfilled (long) gaps: 10667.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6846 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13700 and 17520 will not be filled!
Initialized variable 'Rnet_MDS' with 13297 real gaps for gap filling of all 6853 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'Rnet_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.........2709
Look up table with window size of 14 days with Rg VPD Tair
.........................................20
Look up table with window size of 7 days with Rg
.........................................1600
Mean diurnal course with window size of 0 days: .
.........................131
Mean diurnal course with window size of 1 days: .
.......................1381
Mean diurnal course with window size of 2 days: .
..........548
Look up table with window size of 21 days with Rg VPD Tair
....0
Look up table with window size of 28 days with Rg VPD Tair
....0
Look up table with window size of 35 days with Rg VPD Tair
....0
Look up table with window size of 42 days with Rg VPD Tair
....0
Look up table with window size of 49 days with Rg VPD Tair
....0
Look up table with window size of 56 days with Rg VPD Tair
....0
Look up table with window size of 63 days with Rg VPD Tair
....0
Look up table with window size of 70 days with Rg VPD Tair
....0
Look up table with window size of 14 days with Rg
....0
Look up table with window size of 21 days with Rg
....0
Look up table with window size of 28 days with Rg
....0
Look up table with window size of 35 days with Rg
....0
Look up table with window size of 42 days with Rg
....0
Look up table with window size of 49 days with Rg
....0
Look up table with window size of 56 days with Rg
....0
Look up table with window size of 63 days with Rg
....0
Look up table with window size of 70 days with Rg
....0
Mean diurnal course with window size of 7 days: .
....464
Finished gap filling of 'Rnet_MDS' in 9 seconds. Artificial gaps filled: 6853, real gaps filled: 13297, unfilled (long) gaps: 10667.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6865 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13433 and 17520 will not be filled!
Initialized variable 'TW_0_MDS' with 13370 real gaps for gap filling of all 6567 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'TW_0_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
......2617
Look up table with window size of 14 days with Rg VPD Tair
.......................................29
Look up table with window size of 7 days with Rg
.......................................1575
Mean diurnal course with window size of 0 days: .
.......................168
Mean diurnal course with window size of 1 days: .
.....................1171
Mean diurnal course with window size of 2 days: .
..........499
Look up table with window size of 21 days with Rg VPD Tair
.....0
Look up table with window size of 28 days with Rg VPD Tair
.....0
Look up table with window size of 35 days with Rg VPD Tair
.....0
Look up table with window size of 42 days with Rg VPD Tair
.....0
Look up table with window size of 49 days with Rg VPD Tair
.....0
Look up table with window size of 56 days with Rg VPD Tair
.....0
Look up table with window size of 63 days with Rg VPD Tair
.....0
Look up table with window size of 70 days with Rg VPD Tair
.....0
Look up table with window size of 14 days with Rg
.....0
Look up table with window size of 21 days with Rg
.....0
Look up table with window size of 28 days with Rg
.....0
Look up table with window size of 35 days with Rg
.....0
Look up table with window size of 42 days with Rg
.....0
Look up table with window size of 49 days with Rg
.....0
Look up table with window size of 56 days with Rg
.....0
Look up table with window size of 63 days with Rg
.....0
Look up table with window size of 70 days with Rg
.....0
Mean diurnal course with window size of 7 days: .
.....508
Finished gap filling of 'TW_0_MDS' in 9 seconds. Artificial gaps filled: 6567, real gaps filled: 13370, unfilled (long) gaps: 10953.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6864 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13693 and 17520 will not be filled!
Initialized variable 'CO2c_MDS' with 13643 real gaps for gap filling of all 6828 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'CO2c_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.........2669
Look up table with window size of 14 days with Rg VPD Tair
.........................................41
Look up table with window size of 7 days with Rg
.........................................1609
Mean diurnal course with window size of 0 days: .
.........................169
Mean diurnal course with window size of 1 days: .
.......................1188
Mean diurnal course with window size of 2 days: .
...........546
Look up table with window size of 21 days with Rg VPD Tair
......0
Look up table with window size of 28 days with Rg VPD Tair
......0
Look up table with window size of 35 days with Rg VPD Tair
......0
Look up table with window size of 42 days with Rg VPD Tair
......0
Look up table with window size of 49 days with Rg VPD Tair
......0
Look up table with window size of 56 days with Rg VPD Tair
......0
Look up table with window size of 63 days with Rg VPD Tair
......0
Look up table with window size of 70 days with Rg VPD Tair
......0
Look up table with window size of 14 days with Rg
......0
Look up table with window size of 21 days with Rg
......0
Look up table with window size of 28 days with Rg
......0
Look up table with window size of 35 days with Rg
......0
Look up table with window size of 42 days with Rg
......0
Look up table with window size of 49 days with Rg
......0
Look up table with window size of 56 days with Rg
......0
Look up table with window size of 63 days with Rg
......0
Look up table with window size of 70 days with Rg
......0
Mean diurnal course with window size of 7 days: .
......606
Finished gap filling of 'CO2c_MDS' in 11 seconds. Artificial gaps filled: 6828, real gaps filled: 13643, unfilled (long) gaps: 10692.
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 1 and 6848 will not be filled!
Warning in sFillInit(Var.s, QFVar.s, QFValue.n, FillAll.b) :
  sMDSGapFill::: The long gap between position 13521 and 17520 will not be filled!
Initialized variable 'TW1_MDS' with 13390 real gaps for gap filling of all 6672 values (to estimate uncertainties).
Full MDS algorithm for gap filling of 'TW1_MDS' with LUT(Rg, VPD, Tair) and MDC.
Look up table with window size of 7 days with Rg VPD Tair
............................................................
.......2641
Look up table with window size of 14 days with Rg VPD Tair
........................................27
Look up table with window size of 7 days with Rg
........................................1583
Mean diurnal course with window size of 0 days: .
........................156
Mean diurnal course with window size of 1 days: .
......................1203
Mean diurnal course with window size of 2 days: .
..........511
Look up table with window size of 21 days with Rg VPD Tair
.....0
Look up table with window size of 28 days with Rg VPD Tair
.....0
Look up table with window size of 35 days with Rg VPD Tair
.....0
Look up table with window size of 42 days with Rg VPD Tair
.....0
Look up table with window size of 49 days with Rg VPD Tair
.....0
Look up table with window size of 56 days with Rg VPD Tair
.....0
Look up table with window size of 63 days with Rg VPD Tair
.....0
Look up table with window size of 70 days with Rg VPD Tair
.....0
Look up table with window size of 14 days with Rg
.....0
Look up table with window size of 21 days with Rg
.....0
Look up table with window size of 28 days with Rg
.....0
Look up table with window size of 35 days with Rg
.....0
Look up table with window size of 42 days with Rg
.....0
Look up table with window size of 49 days with Rg
.....0
Look up table with window size of 56 days with Rg
.....0
Look up table with window size of 63 days with Rg
.....0
Look up table with window size of 70 days with Rg
.....0
Mean diurnal course with window size of 7 days: .
.....551
Finished gap filling of 'TW1_MDS' in 10 seconds. Artificial gaps filled: 6672, real gaps filled: 13390, unfilled (long) gaps: 10848.
Saved plot to: ./Douglas_2014_FP_NEE.pdf
Saved plot to: ./Douglas_2014_Flux_NEE.pdf
Saved plot to: ./Douglas_2014_FP_LE.pdf
Saved plot to: ./Douglas_2014_Flux_LE.pdf
Saved plot to: ./Douglas_2014_FP_H.pdf
Saved plot to: ./Douglas_2014_Flux_H.pdf
Saved plot to: ./Douglas_2014_FP_Rg.pdf
Saved plot to: ./Douglas_2014_Flux_Rg.pdf
Saved plot to: ./Douglas_2014_FP_VPD.pdf
Saved plot to: ./Douglas_2014_Flux_VPD.pdf
Saved plot to: ./Douglas_2014_FP_rH.pdf
Saved plot to: ./Douglas_2014_Flux_rH.pdf
Saved plot to: ./Douglas_2014_FP_Tair.pdf
Saved plot to: ./Douglas_2014_Flux_Tair.pdf
Saved plot to: ./Douglas_2014_FP_Ustar_MDS.pdf
Saved plot to: ./Douglas_2014_Flux_Ustar_MDS.pdf
Saved plot to: ./Douglas_2014_FP_Tau_MDS.pdf
Saved plot to: ./Douglas_2014_Flux_Tau_MDS.pdf
Saved plot to: ./Douglas_2014_FP_ws_MDS.pdf
Saved plot to: ./Douglas_2014_Flux_ws_MDS.pdf
Saved plot to: ./Douglas_2014_FP_Press_MDS.pdf
Saved plot to: ./Douglas_2014_Flux_Press_MDS.pdf
Saved plot to: ./Douglas_2014_FP_PAR_MDS.pdf
Saved plot to: ./Douglas_2014_Flux_PAR_MDS.pdf
Saved plot to: ./Douglas_2014_FP_Rnet_MDS.pdf
Saved plot to: ./Douglas_2014_Flux_Rnet_MDS.pdf
Saved plot to: ./Douglas_2014_FP_TW_0_MDS.pdf
Saved plot to: ./Douglas_2014_Flux_TW_0_MDS.pdf
Saved plot to: ./Douglas_2014_FP_CO2c_MDS.pdf
Saved plot to: ./Douglas_2014_Flux_CO2c_MDS.pdf
Saved plot to: ./Douglas_2014_FP_TW1_MDS.pdf
Saved plot to: ./Douglas_2014_Flux_TW1_MDS.pdf
Saved plot to: ./Douglas_2014_FP_NEE_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_NEE_f.pdf
Saved plot to: ./Douglas_2014_DSumU_NEE_f.pdf
Saved plot to: ./Douglas_2014_Flux_NEE_f.pdf
Saved plot to: ./Douglas_2014_FP_LE_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_LE_f.pdf
Saved plot to: ./Douglas_2014_DSumU_LE_f.pdf
Saved plot to: ./Douglas_2014_Flux_LE_f.pdf
Saved plot to: ./Douglas_2014_FP_H_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_H_f.pdf
Saved plot to: ./Douglas_2014_DSumU_H_f.pdf
Saved plot to: ./Douglas_2014_Flux_H_f.pdf
Saved plot to: ./Douglas_2014_FP_Rg_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_Rg_f.pdf
Saved plot to: ./Douglas_2014_DSum_Rg_f.pdf
Saved plot to: ./Douglas_2014_Flux_Rg_f.pdf
Saved plot to: ./Douglas_2014_FP_VPD_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_VPD_f.pdf
Saved plot to: ./Douglas_2014_DSum_VPD_f.pdf
Saved plot to: ./Douglas_2014_Flux_VPD_f.pdf
Saved plot to: ./Douglas_2014_FP_rH_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_rH_f.pdf
Saved plot to: ./Douglas_2014_DSum_rH_f.pdf
Saved plot to: ./Douglas_2014_Flux_rH_f.pdf
Saved plot to: ./Douglas_2014_FP_Tair_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_Tair_f.pdf
Saved plot to: ./Douglas_2014_DSum_Tair_f.pdf
Saved plot to: ./Douglas_2014_Flux_Tair_f.pdf
Saved plot to: ./Douglas_2014_FP_Ustar_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_Ustar_MDS_f.pdf
Saved plot to: ./Douglas_2014_DSumU_Ustar_MDS_f.pdf
Saved plot to: ./Douglas_2014_Flux_Ustar_MDS_f.pdf
Saved plot to: ./Douglas_2014_FP_Tau_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_Tau_MDS_f.pdf
Saved plot to: ./Douglas_2014_DSumU_Tau_MDS_f.pdf
Saved plot to: ./Douglas_2014_Flux_Tau_MDS_f.pdf
Saved plot to: ./Douglas_2014_FP_ws_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_ws_MDS_f.pdf
Saved plot to: ./Douglas_2014_DSumU_ws_MDS_f.pdf
Saved plot to: ./Douglas_2014_Flux_ws_MDS_f.pdf
Saved plot to: ./Douglas_2014_FP_Press_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_Press_MDS_f.pdf
Saved plot to: ./Douglas_2014_DSumU_Press_MDS_f.pdf
Saved plot to: ./Douglas_2014_Flux_Press_MDS_f.pdf
Saved plot to: ./Douglas_2014_FP_PAR_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_PAR_MDS_f.pdf
Saved plot to: ./Douglas_2014_DSumU_PAR_MDS_f.pdf
Saved plot to: ./Douglas_2014_Flux_PAR_MDS_f.pdf
Saved plot to: ./Douglas_2014_FP_Rnet_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_Rnet_MDS_f.pdf
Saved plot to: ./Douglas_2014_DSumU_Rnet_MDS_f.pdf
Saved plot to: ./Douglas_2014_Flux_Rnet_MDS_f.pdf
Saved plot to: ./Douglas_2014_FP_TW_0_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_TW_0_MDS_f.pdf
Saved plot to: ./Douglas_2014_DSumU_TW_0_MDS_f.pdf
Saved plot to: ./Douglas_2014_Flux_TW_0_MDS_f.pdf
Saved plot to: ./Douglas_2014_FP_CO2c_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_CO2c_MDS_f.pdf
Saved plot to: ./Douglas_2014_DSumU_CO2c_MDS_f.pdf
Saved plot to: ./Douglas_2014_Flux_CO2c_MDS_f.pdf
Saved plot to: ./Douglas_2014_FP_TW1_MDS_f.pdf
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: January!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: February!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: March!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: April!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i,  :
  .sPlotDiurnalCycleM::: No data available for month: November!
Warning in .self$.sPlotDiurnalCycleM(Var.s, QFVar.s, QFValue.n, Month.i) :
  .sPlotDiurnalCycleM::: No data available for month: December!
Saved plot to: ./Douglas_2014_DC_TW1_MDS_f.pdf
Saved plot to: ./Douglas_2014_DSumU_TW1_MDS_f.pdf
Saved plot to: ./Douglas_2014_Flux_TW1_MDS_f.pdf
Number of NA convertered to '-9999': 1927589
Wrote tab separated textfile: output.txt
> 
> print("converting generated output pdf files to png format for display on results page.") # done in shell script 
[1] "converting generated output pdf files to png format for display on results page."
> 
> # write logEntry that will be appended by to reddy_jobs_out.txt by reddy_bjobs.sh
> logEntry <- paste( time["user.self"], retval$mode, retval$inputSize, sep="," )
> cat( logEntry, file="logEntry.txt")
> 
> 
> 
> proc.time()
   user  system elapsed 
190.495   0.248 191.147 
