;THIS FILE SHOULD BE RUN BEFORE RUNNING DAYFLUX_WC.PRO
;USE IS AS FOLLOWS:
;           at idl prompt:    @compileflux
;
;This code sets all input and output file paths, and compiles necessary code.
;
;Written by BWBerger and DCarrington early 3/1999?
;Modified by BWBerger mid-February 2000 to add msgs directory and to move
;general flux code to its own directory.
;Modified by BWB 3/2/00 to change !graphs system variable into two new
;  system variables !plots_hourly and !plots_daily so that hourly and
;  daily plots are now saved to their own directories.
;  Also, the auxilliary input data location is now given by !auxdata_wc instead
;  of !tables (which was '/data/eddy/wcreek/data/tables/').
;
;==============================================================================
;INPUT DIRECTORIES
; changed on Aug 17th. directories changed for PSU  
; chnaged on Sep 19, 2000, for lcreek. just replace wcreek of lcreek
; lcreek has the same data format as wcreek, so we still use the code of wcreek
  
;defsysv,'!DATA','/data/eddy2/lcreek/'
;defsysv,'!AUXDATA_WC','/data/eddy/cheas/lcreek/data/'

 defsysv,'!DATA','/eddy/s4/lcreek/rawa/'
 defsysv,'!AUXDATA_WC','/eddy/s4/lcreek/data/'

;added on Sep. 19 2000 for hrmet_wc_psu

; defsysv,'!HRMET','/eddy/s4/cheas/wcreek/qmix/trylc' 
 defsysv,'!HRMET','/eddy/s4/lcreek/qmix/lc' 
;-----

;OUTPUT DIRECTORIES
defsysv,'!LAG','/eddy/s2/bcook/lcreek/output/lag/'
defsysv,'!ROT','/eddy/s2/bcook/lcreek/output/rot/'
defsysv,'!FLX','/eddy/s2/bcook/lcreek/output/flx/'
defsysv,'!STATS','/eddy/s2/bcook/lcreek/output/stats/'
defsysv,'!SPEC','/eddy/s2/bcook/lcreek/output/spec/'
defsysv,'!PLOTS_HOURLY','/eddy/s2/bcook/lcreek/output/plots/hourly/'
defsysv,'!PLOTS_DAILY','/eddy/s2/bcook/lcreek/output/plots/daily/'
defsysv,'!CALMAT','/eddy/s2/bcook/lcreek/output/calmat/'
defsysv,'!MSGS','/eddy/s2/bcook/lcreek/output/msgs/'

;******************************************************************************
;compile necessary code
;******************************************************************************
;flux code specific willow creek

.run /eddy/s1/lib/wcreek/hourly/clicor_wc.pro
.run /eddy/s1/lib/bruce/lcreek/dayflux_lc.pro
.run /eddy/s1/lib/wcreek/hourly/findlag_wc.pro      
.run /eddy/s1/lib/wcreek/hourly/getcalmat_wc.pro
.run /eddy/s1/lib/wcreek/hourly/getdailydata_wc.pro
.run /eddy/s1/lib/lcreek/hourly/getdata_lc.pro         
.run /eddy/s1/lib/lcreek/hourly/getlongterm_theta_lc.pro 
.run /eddy/s1/lib/lcreek/hourly/getrotated_lc.pro       
.run /eddy/s1/lib/wcreek/hourly/gettablelags_wc.pro
.run /eddy/s1/lib/bruce/lcreek/hrflux_lc.pro
.run /eddy/s1/lib/wcreek/hourly/hrmet_wc.pro
.run /eddy/s1/lib/wcreek/hourly/lagcalc_wc.pro
.run /eddy/s1/lib/wcreek/hourly/loadwcreek2.pro
.run /eddy/s1/lib/wcreek/hourly/openclose_files_wc.pro
.run /eddy/s1/lib/lcreek/hourly/plothourly_lc.pro      
.run /eddy/s1/lib/lcreek/hourly/plotlagcovar_lc.pro   
.run /eddy/s1/lib/lcreek/hourly/plotlic_lc.pro        
.run /eddy/s1/lib/lcreek/hourly/plotuvwt_lc.pro       
.run /eddy/s1/lib/lcreek/hourly/plotvariables_lc.pro   
.run /eddy/s1/lib/wcreek/hourly/qlicor_wc.pro
.run /eddy/s1/lib/wcreek/hourly/save_wc.pro
.run /eddy/s1/lib/wcreek/hourly/screenl_wc.pro
.run /eddy/s1/lib/wcreek/hourly/screenu_wc.pro
.run /eddy/s1/lib/lcreek/hourly/speccorrec_ift_lc.pro 
.run /eddy/s1/lib/wcreek/hourly/hrmet_wc_psu.pro

.run /eddy/s1/lib/lcreek/hourly/specplot_lc.pro

;------------------------------------------------------------------------------
;general flux code

.run /eddy/s1/lib/fluxgeneral/angles.pro
.run /eddy/s1/lib/fluxgeneral/convert.pro
.run /eddy/s1/lib/fluxgeneral/ddensity.pro
.run /eddy/s1/lib/fluxgeneral/despuvwt2.pro
.run /eddy/s1/lib/fluxgeneral/finalrange.pro
.run /eddy/s1/lib/fluxgeneral/getnextdaydate.pro
.run /eddy/s1/lib/fluxgeneral/lagcovar_window.pro
.run /eddy/s1/lib/fluxgeneral/qdensity.pro
.run /eddy/s1/lib/fluxgeneral/rotat2.pro
.run /eddy/s1/lib/fluxgeneral/virtotemp.pro
.run /eddy/s1/lib/fluxgeneral/virtotempflx.pro

;------------------------------------------------------------------------------
;general code

.run /eddy/s1/lib/general/baremusic.pro
.run /eddy/s1/lib/general/col.pro
.run /eddy/s1/lib/general/covar.pro
.run /eddy/s1/lib/general/cplot.pro
.run /eddy/s1/lib/general/datestring.pro
.run /eddy/s1/lib/general/despike.pro
.run /eddy/s1/lib/general/detren.pro
.run /eddy/s1/lib/general/edgedetect.pro
.run /eddy/s1/lib/general/findi.pro
.run /eddy/s1/lib/general/goodindex.pro
.run /eddy/s1/lib/general/julian.pro
.run /eddy/s1/lib/general/jdate.pro
.run /eddy/s1/lib/general/jdatetodate.pro
.run /eddy/s1/lib/general/len.pro
.run /eddy/s1/lib/general/load.pro
.run /eddy/s1/lib/general/loadpdq.pro
.run /eddy/s1/lib/general/marathon.pro
;.run /eddy/s1/lib/general/mean.pro
.run /eddy/s1/lib/general/meanbadval.pro
.run /eddy/s1/lib/general/medfil.pro
.run /eddy/s1/lib/general/minbadval.pro
.run /eddy/s1/lib/general/momentbadval.pro
.run /eddy/s1/lib/general/mplot.pro
.run /eddy/s1/lib/general/refline.pro
.run /eddy/s1/lib/general/row.pro
.run /eddy/s1/lib/general/zapbadval.pro
.run /eddy/s1/lib/general/zapextrapo.pro